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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs13420269 chr2:228073973 A/G 0 406 15.72 14.43 1.23 KM Plot
LGG rs13425163 chr2:202091038 G/A 5.58E-14 405 15.17 16.45 6.63 KM Plot
LGG rs13426559 chr2:228088275 C/T 0 407 15.72 14.43 1.27 KM Plot
LGG rs13427303 chr2:228075876 A/C 0 406 15.72 14.43 1.23 KM Plot
LGG rs13427505 chr2:228076007 A/G 0 406 15.72 14.43 1.23 KM Plot
LGG rs13427767 chr2:228076241 A/G 0 406 15.72 14.43 1.23 KM Plot
LGG rs13431188 chr2:85970955 A/C 2.56E-5 407 6.18 17.83 15.17 KM Plot
LGG rs13432060 chr2:17572609 A/G 6.9E-5 400 15.18 16.6 5.23 KM Plot
LGG rs1350166 chr12:69636314 G/T 7.89E-5 398 15.17 14.8 18.23 KM Plot
LGG rs1354594 chr1:219185909 C/G 5.48E-5 406 14.43 18.63 15.65 KM Plot
LGG rs1368157 chr10:64001114 T/C 0.000142 402 12.17 15.57 15.78 KM Plot
LGG rs1368301 chr5:155978502 C/A 5.06E-6 406 15.27 15.3 15.37 KM Plot
LGG rs1370977 chr5:92773554 A/C 1.61E-5 407 18.57 16.6 15.17 KM Plot
LGG rs1376140 chr9:24027323 C/T 2.63E-5 407 15.25 14.88 19.2 KM Plot
LGG rs1377456 chr11:61215052 G/A 3.06E-5 406 17.73 17.67 14.5 KM Plot